Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015923465.1_cds_XP_016472070.1_64341
CDS Infomation

[gene=LOC107794122] [db_xref=GeneID:107794122] [protein=sister chromatid cohesion 1 protein 3-like isoform X2] [protein_id=XP_016472070.1] [location=join(12100..12223,12598..12859,12940..12986,13092..13141,13232..13299,13381..13724,13813..13927,14019..14155,14243..14610,14974..15013,15190..15265,15476..15488)] [gbkey=CDS]
Sequence

ATGTTCTATTCGCTGACACTTTTGGGGCGGAAAGGTCCATTAGCGACCGTATGGCAGGCA
GCAACTATTCAAAGCAGGTTGAAGAAGTCTCATTATGCTTCCACTAATATACCCTCCACT
GTTGAGTTAATCATGTTTCCGGACGTACCCCTTGCACTACGATGGTCTGCTCAGCTTCTA
CTTGGAGTTGTTAGGATATACTCTAAGCAAGTTGAATACTTTCTCCAAGACTGCAGAACC
TTAGAAACGGGAATAAGAAAGTCCATTTTGTCTACAAATCTCAATCTACCGGAAGATGCT
CTTCATGCACCATACCAATCCATCACTTTGCCAGAAACATTTGAACTTGATGCCGTCGTT
TTTGATGATGATGTTGACCTGAATAGGTTTGGAGATACTCATCTTAAAAGTTACGAAGAG
ACAACTTTGGAAGATCAAATACTAATGCGTGAAGATCAGTACGTAGCTATTTTCATTGAT
GAGGACATCGGGAATAGTTTGTCAAAATCGGGTGAAGTTTCTGGATTAGGTGCCATGCCT
ATAGAGACTGATTCTGATCCATCAAACCTAGATGGAATTCCTGCTCAATCCCAAAATTCT
TCTCCTAAGAATCTGGCAGCACTAAACGGAGGAACTGTTGGCGGTGACATTCCTCAAGAT
ATTCCAGAAATTGAAATCATGCGTGATGCCGTCTATGATCATGGTTCTGAGAATGTTCCC
TTATGGTCAGATCAATGGAATGATGTAATGGAACCAGATAAAATTCTGGAGGAAGAGATC
ATGAAAGACAAGGAAAGTGCAAGCCTAGTCGTGGAAGAGATGGTCGAACGAGACGAACCA
CCTTCTGCTACTTCAGCAGAGGTTCAAGAATTCACTAATCCACAGATATCTTTTGGGCAT
CAGTCACCTGATTTATTACTTCGATCAACACCACCTCCTGAGGAGCCAAAAGCAAGGAGA
AGAAAGCGAAAGCTACTCATTGATGAGGATGATATAGTATTGTCGAATGATGAAATTGGA
AGGCTACTAAATGATACCAGTGCATTGAAACGCCGGAGAAAGAATGCTCCTTTGTCTTCT
TTGGACATATGGAAACTAAACAAGAGACATACAAAAGATGGAATGTTATTTGAGTCTTTA
TTAACCGGAGTACATAATGATCTCTGCAACATCTACAAGGAAGACTTCATTTCAGCAAAA
ATCAAGACCGCTTCCTCACTAGAGGATCATGTAGAACCCAGCGGTAACCAATCCCCTCCA
CCTGGGAATGATCTTGGGATTGAAATCGAAAGACTACGTGATAATCAAGAATTTGCATGC
ACCAATTTGTTGTCTGAAATTTTGCCTTCACCAAATAAATTCATTTCCTCTCCACAAATG
CCCACGCCCGACCCAGCAGCATCTACTGGGCGTGCTGGTTCCGATATGGAGACCCCTTCA
ACATGGTACGGAGAGGGACTAGATGTGGAGAATACCATTCTGTCTGATATTCCTGAGTTT
GATAACTCTGCTGGGGATCTGAGTTTTCTGGACCAAGATGACAGGACTCCCACCGGAACT
CCTGAAGTTGGTTACTTATCACGTAAGCAAGGGGGAACACCAGAGTTTGACACATTACCT
GCTAGAACAAGAATAGTCTTTTAA

Peptide Sequence

PEP ID

XP_016472070.1
PEP Infomation

PREDICTED: sister chromatid cohesion 1 protein 3-like isoform X2 [Nicotiana tabacum]
Sequence

MFYSLTLLGRKGPLATVWQAATIQSRLKKSHYASTNIPSTVELIMFPDVPLALRWSAQLL
LGVVRIYSKQVEYFLQDCRTLETGIRKSILSTNLNLPEDALHAPYQSITLPETFELDAVV
FDDDVDLNRFGDTHLKSYEETTLEDQILMREDQYVAIFIDEDIGNSLSKSGEVSGLGAMP
IETDSDPSNLDGIPAQSQNSSPKNLAALNGGTVGGDIPQDIPEIEIMRDAVYDHGSENVP
LWSDQWNDVMEPDKILEEEIMKDKESASLVVEEMVERDEPPSATSAEVQEFTNPQISFGH
QSPDLLLRSTPPPEEPKARRRKRKLLIDEDDIVLSNDEIGRLLNDTSALKRRRKNAPLSS
LDIWKLNKRHTKDGMLFESLLTGVHNDLCNIYKEDFISAKIKTASSLEDHVEPSGNQSPP
PGNDLGIEIERLRDNQEFACTNLLSEILPSPNKFISSPQMPTPDPAASTGRAGSDMETPS
TWYGEGLDVENTILSDIPEFDNSAGDLSFLDQDDRTPTGTPEVGYLSRKQGGTPEFDTLP
ARTRIVF

Transcript Sequence

Gene sequence data has not been registered.